Microarray data

Here you can find supplementary microarray data for papers of the Industrial Microbiology group.

2005

• Jansen M.L., Diderich J.A., Mashego M., Hassane A., de Winde J.H., Daran-Lapujade P., Pronk J.T. 2005. Prolonged selection in aerobic, glucose-limited chemostat cultures of Saccharomyces cerevisiae causes a partial loss of glycolytic capacity. Microbiology 151 (5): 1657-1669
• Boer V.M., Daran J.M., Almering M.J., de Winde J.H., Pronk J.T. 2005. Contribution of the Saccharomyces cerevisiae transcriptional regulator Leu3p to physiology and gene expression in nitrogen- and carbon-limited chemostat cultures. FEMS Yeast Research 5 (10): 885-897
• Tai S.L., Boer V.M., Daran-Lapujade P., Walsh M.C., de Winde J.H., Daran J.M., Pronk J.T. 2005. Two-dimensional transcriptome analysis in chemostat cultures: combinatorial effects of oxygen availability and macronutrient limitation in Saccharomyces cerevisiae. J Biol Chem. 280 (1): 437-447

2004

• Daran-Lapujade P, Jansen ML, Daran JM, Van Gulik W, De Winde JH, Pronk JT. 2004. Role of transcriptional regulation in controlling fluxes in central carbon metabolism of Saccharomyces cerevisiae, a chemostat culture study . J. Biol. Chem. 279: 9125-9138

2003

• Boer, V. M., J. H. de Winde, J. T. Pronk, and M. D. W. Piper. 2003. The genome-wide transcriptional responses of Saccharomyces cerevisiae grown on glucose in aerobic chemostat cultures limited for carbon, nitrogen, phosphorus, or sulfur. J. Biol. Chem. 278:3265-3274.
• Daran-Lapujade, P., J-M. Daran, P. Kötter, T. Petit, M.D.W. Piper, J.T. Pronk. 2003. Comparative genotyping of the Saccharomyces cerevisiae laboratory strains S288C and CEN.PK113-7D using oligonucleotide microarrays. FEMS Yeast Res. 4:259-269
• Vuralhan Z, Morais M. A., Tai S. L., Piper M. D., Pronk J. T. 2003 Identification and Characterization of Phenylpyruvate Decarboxylase Genes in Saccharomyces cerevisiae . Appl. Environ. Microbiol. 69: 4534-4541

2002

• Piper, M. D. W., P. Daran-Lapujade, C. Bro, B. Regenberg, S. Knudsen, J. Nielsen, and J. T. Pronk. 2002. Reproducibility of oligonucleotide microarray transcriptome analyses: an interlaboratory comparison using chemostat cultures of Saccharomyces cerevisiae . J. Biol. Chem. 277:37001-37008.